Transcript: lnc-EVX1-14:18

Basic information

LNCipedia transcript ID: lnc-EVX1-14:18 
LNCipedia gene ID: lnc-EVX1-14
RefSeq ID: NR_122122
Location (hg19): chr7:27655593-27667111
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1312 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_122122; NR_122122.1
Alternative gene names: TSL


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.1204 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EVX1-14:18 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TAX1BP1-1:2
4.0 lnc-TAX1BP1-1:2
4.1 lnc-EVX1-14:18
5.0 lnc-EVX1-14:18
5.1 lnc-SNX10-33:18
5.2 lnc-EVX1-14:18