Transcript: lnc-EVX1-14:2

Basic information

LNCipedia transcript ID: lnc-EVX1-14:2 
LNCipedia gene ID: lnc-EVX1-14
Location (hg19): chr7:27401462-27448577
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 549 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000489284; ENST00000489284.1; RP5-1103I5.1-001; OTTHUMT00000350400.1
Alternative gene names: ENSG00000244597; RP5-1103I5.1; ENSG00000244597.1; OTTHUMG00000158206.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.7726 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EVX1-14:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EVX1-12:3
3.1 lnc-EVX1-14:2
4.0 lnc-EVX1-14:2
4.1 lnc-EVX1-14:2
5.0 lnc-EVX1-14:2
5.1 lnc-SNX10-33:9
5.2 lnc-EVX1-14:2