Transcript: lnc-EXOC2-2:1

Basic information

LNCipedia transcript ID: lnc-EXOC2-2:1 
LNCipedia gene ID: lnc-EXOC2-2
Location (hg19): chr6:775456-780214
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1727 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011201; NONHSAT106135
Alternative gene names: XLOC_005570; linc-HUS1B-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.0499 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EXOC2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EXOC2-2:1
3.1 lnc-EXOC2-2:1
4.0 lnc-EXOC2-2:1
4.1 lnc-EXOC2-2:1
5.0 lnc-EXOC2-2:1
5.1 lnc-ECI2-191:1
5.2 lnc-EXOC2-2:1