Transcript: lnc-EXOSC6-1:3

Basic information

LNCipedia transcript ID: lnc-EXOSC6-1:3 
LNCipedia gene ID: lnc-EXOSC6-1
Location (hg19): chr16:70253787-70260316
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2084 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT143412
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 305.1011 coding 
CPAT coding probability 14.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EXOSC6-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EXOSC6-1:3
4.0 lnc-EXOSC6-1:3
4.1 lnc-EXOSC6-1:3
5.0 lnc-EXOSC6-1:3
5.1 lnc-NOB1-14:3
5.2 lnc-EXOSC6-1:3