Transcript: lnc-EXOSC6-3:21

Basic information

LNCipedia transcript ID: lnc-EXOSC6-3:21 
LNCipedia gene ID: lnc-EXOSC6-3
Location (hg19): chr16:70011775-70099851
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2820 bp
Exons: 26
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000325845.7
Alternative gene names: ENSG00000196696.8; PDXDC2P


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2836.8058 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EXOSC6-3:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EXOSC6-3:7
4.0 lnc-RP11-419C5.2.1-3:2
4.1 lnc-RP11-419C5.2.1-3:2
5.0 lnc-RP11-419C5.2.1-3:2
5.1 lnc-NOB1-5:10
5.2 lnc-EXOSC6-3:21