Transcript: lnc-EXTL3-4:1

Basic information

LNCipedia transcript ID: lnc-EXTL3-4:1 
LNCipedia gene ID: lnc-EXTL3-4
Location (hg19): chr8:28910034-28911276
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 307 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000561377.1; CTD-2647L4.3-001; OTTHUMT00000417036.1; NONHSAT125776
Alternative gene names: ENSG00000259599.1; CTD-2647L4.3; OTTHUMG00000172134.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.1675 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EXTL3-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EXTL3-4:1
4.0 lnc-EXTL3-4:1
4.1 lnc-EXTL3-4:1
5.0 lnc-EXTL3-4:1
5.1 lnc-WRN-48:1
5.2 lnc-EXTL3-4:1