Transcript: lnc-EXTL3-4:2

Basic information

LNCipedia transcript ID: lnc-EXTL3-4:2 
LNCipedia gene ID: lnc-EXTL3-4
Location (hg19): chr8:28911180-28911635
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 375 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015260; NONHSAT125780
Alternative gene names: XLOC_006752; linc-LEPROTL1-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -573.1976 non-coding 
CPAT coding probability 10.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EXTL3-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EXTL3-2:1
3.1 lnc-EXTL3-4:2
4.0 lnc-EXTL3-4:2
4.1 lnc-EXTL3-4:2
5.0 lnc-EXTL3-4:2
5.1 lnc-WRN-48:2
5.2 lnc-EXTL3-4:2