Transcript: lnc-EYS-2:1

Basic information

LNCipedia transcript ID: lnc-EYS-2:1 
LNCipedia gene ID: lnc-EYS-2
Ensembl Gene ID: ENSG00000266680
Ensembl Transcript ID: ENST00000584934
Location (hg19): chr6:64280910-64282313
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1404 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000584934.1; RP5-1148A21.3-001; OTTHUMT00000446589.1; NONHSAT113350
Alternative gene names: ENSG00000266680.1; RP5-1148A21.3; OTTHUMG00000179475.1; AL135905.2; AL135905.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.6069 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EYS-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EYS-2:1
4.0 lnc-EYS-2:1
4.1 lnc-EYS-2:1
5.0 lnc-EYS-2:1
5.1 lnc-GSTA5-65:1
5.2 lnc-EYS-2:1