Transcript: lnc-F11-2:3

Basic information

LNCipedia transcript ID: lnc-F11-2:3 
LNCipedia gene ID: lnc-F11-2
Ensembl Gene ID: ENSG00000250829
Ensembl Transcript ID: ENST00000507644
Location (hg19): chr4:187812123-187813520
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 496 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000507644.2
Alternative gene names: ENSG00000250829.2; RP11-11N5.1; AC108865.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 38.1831 non-coding 
CPAT coding probability 2.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-F11-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-F11-2:3
4.0 lnc-F11-2:3
4.1 lnc-F11-2:3
5.0 lnc-F11-2:3
5.1 lnc-F11-12:12
5.2 lnc-F11-2:3