Transcript: lnc-F11R-2:1

Basic information

LNCipedia transcript ID: lnc-F11R-2:1 
LNCipedia gene ID: lnc-F11R-2
Location (hg19): chr1:160955474-160958847
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3374 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1519:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.654 non-coding 
CPAT coding probability 5.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-F11R-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-F11R-2:1
4.1 lnc-F11R-2:1
5.0 lnc-F11R-2:1
5.1 lnc-IGSF8-13:1
5.2 lnc-F11R-2:1