Transcript: lnc-FAAH2-1:11

Basic information

LNCipedia transcript ID: lnc-FAAH2-1:11 
LNCipedia gene ID: lnc-FAAH2-1
Ensembl Gene ID: ENSG00000226310
Ensembl Transcript ID: ENST00000439622
Location (hg19): chrX:57148095-57153676
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 665 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00016988; ENST00000439622.1; RP3-323P24.3-001; OTTHUMT00000056916.1; NONHSAT137283
Alternative gene names: XLOC_007996; linc-FAAH2-2; ENSG00000226310.1; RP3-323P24.3; OTTHUMG00000021681.1; AL022157.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.8648 non-coding 
CPAT coding probability 4.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAAH2-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAAH2-2:1
3.1 lnc-FAAH2-2:1
4.0 lnc-FAAH2-2:1
4.1 lnc-FAAH2-1:11
5.0 lnc-FAAH2-1:11
5.1 lnc-MAGED2-19:7
5.2 lnc-FAAH2-1:11