Transcript: lnc-FAF1-2:1

Basic information

LNCipedia transcript ID: lnc-FAF1-2:1 
LNCipedia gene ID: lnc-FAF1-2
Location (hg19): chr1:50902700-50902978
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 279 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000607815.1
Alternative gene names: ENSG00000271782.1; RP5-850O15.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAF1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAF1-2:1
4.0 lnc-FAF1-2:1
4.1 lnc-FAF1-2:1
5.0 lnc-FAF1-2:1
5.1 lnc-DMRTA2-2:3
5.2 lnc-FAF1-2:1