Transcript: lnc-FAH-1:1

Basic information

LNCipedia transcript ID: lnc-FAH-1:1 
LNCipedia gene ID: lnc-FAH-1
Location (hg19): chr15:80481448-80490229
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 983 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023479; NONHSAT047681
Alternative gene names: XLOC_011327; linc-ARNT2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.7803 non-coding 
CPAT coding probability 1.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAH-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAH-1:1
3.1 lnc-FAH-1:1
4.0 lnc-FAH-1:1
4.1 lnc-FAH-1:1
5.0 lnc-FAH-1:1
5.1 lnc-CFAP161-14:1
5.2 lnc-FAH-1:1