Transcript: lnc-FAM105A-3:1

Basic information

LNCipedia transcript ID: lnc-FAM105A-3:1 
LNCipedia gene ID: lnc-FAM105A-3
Location (hg19): chr5:14562528-14563084
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 557 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr5_611_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.0194 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM105A-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM105A-3:1
4.0 lnc-FAM105A-3:1
4.1 lnc-FAM105A-3:1
5.0 lnc-FAM105A-3:1
5.1 lnc-CARD6-221:1
5.2 lnc-FAM105A-3:1