Transcript: lnc-FAM110B-3:2

Basic information

LNCipedia transcript ID: lnc-FAM110B-3:2 
LNCipedia gene ID: lnc-FAM110B-3
Location (hg19): chr8:58658708-58662754
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2457 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00014492
Alternative gene names: XLOC_006809; linc-FAM110B-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -65.3725 non-coding 
CPAT coding probability 2.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM110B-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM110B-3:1
3.1 lnc-FAM110B-3:2
4.0 lnc-FAM110B-3:2
4.1 lnc-FAM110B-3:2
5.0 lnc-FAM110B-3:2
5.1 lnc-SDCBP-10:2
5.2 lnc-FAM110B-3:2