Transcript: lnc-FAM120B-3:2

Basic information

LNCipedia transcript ID: lnc-FAM120B-3:2 
LNCipedia gene ID: lnc-FAM120B-3
Location (hg19): chr6:170484893-170494926
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7390 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012032; NONHSAT116258
Alternative gene names: XLOC_005563; linc-FAM120B-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 72.2249 coding 
CPAT coding probability 94.85% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM120B-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM120B-2:2
3.1 lnc-FAM120B-3:2
4.0 lnc-FAM120B-3:2
4.1 lnc-FAM120B-3:2
5.0 lnc-FAM120B-3:2
5.1 lnc-SYTL3-131:2
5.2 lnc-FAM120B-3:2