Transcript: lnc-FAM120B-4:4

Basic information

LNCipedia transcript ID: lnc-FAM120B-4:4 
LNCipedia gene ID: lnc-FAM120B-4
RefSeq ID: NR_125878
Location (hg19): chr6:170475866-170478251
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 530 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125878; NR_125878.1
Alternative gene names: LOC102724511


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -56.7482 non-coding 
CPAT coding probability 1.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM120B-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM120B-4:4
4.0 lnc-FAM120B-4:4
4.1 lnc-FAM120B-4:4
5.0 lnc-FAM120B-4:4
5.1 lnc-SYTL3-130:1
5.2 lnc-FAM120B-4:4