Transcript: lnc-FAM151A-3:1

Basic information

LNCipedia transcript ID: lnc-FAM151A-3:1 
LNCipedia gene ID: lnc-FAM151A-3
Location (hg19): chr1:54878381-54879139
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 454 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00000524; NONHSAT003375
Alternative gene names: XLOC_000840; linc-SSBP3-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.1897 non-coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM151A-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM151A-2:1
3.1 lnc-FAM151A-3:1
4.0 lnc-FAM151A-3:1
4.1 lnc-FAM151A-3:1
5.0 lnc-FAM151A-3:1
5.1 lnc-CYB5RL-3:1
5.2 lnc-FAM151A-3:1