Transcript: lnc-FAM153C-1:1

Basic information

LNCipedia transcript ID: lnc-FAM153C-1:1 
LNCipedia gene ID: lnc-FAM153C-1
Location (hg19): chr5:177485726-177490591
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 675 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010854; NONHSAT105514
Alternative gene names: XLOC_004671; linc-N4BP3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.7729 non-coding 
CPAT coding probability 0.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM153C-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM153C-1:1
3.1 lnc-FAM153C-1:1
4.0 lnc-FAM153C-1:1
4.1 lnc-FAM153C-1:1
5.0 lnc-FAM153C-1:1
5.1 lnc-MAML1-25:11
5.2 lnc-FAM153C-1:1