Transcript: lnc-FAM174B-2:11

Basic information

LNCipedia transcript ID: lnc-FAM174B-2:11 
LNCipedia gene ID: lnc-FAM174B-2
Location (hg19): chr15:93325223-93331832
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 681 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00023791
Alternative gene names: XLOC_011586; linc-FAM174B


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.09 non-coding 
CPAT coding probability 1.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM174B-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RGMA-1:2
3.1 lnc-RGMA-2:2
4.0 lnc-FAM174B-2:11
4.1 lnc-FAM174B-2:11
5.0 lnc-FAM174B-2:11
5.1 lnc-CIB1-35:5
5.2 lnc-FAM174B-2:11