Transcript: lnc-FAM196A-3:2

Basic information

LNCipedia transcript ID: lnc-FAM196A-3:2 
LNCipedia gene ID: lnc-FAM196A-3
Location (hg19): chr10:129058909-129060224
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1022 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT016959
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.309 non-coding 
CPAT coding probability 75.48% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM196A-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM196A-3:2
4.0 lnc-FAM196A-3:2
4.1 lnc-FAM196A-3:2
5.0 lnc-FAM196A-3:2
5.1 lnc-ADAM12-7:1
5.2 lnc-FAM196A-3:2