Transcript: lnc-FAM19A2-2:7

Basic information

LNCipedia transcript ID: lnc-FAM19A2-2:7 
LNCipedia gene ID: lnc-FAM19A2-2
Location (hg19): chr12:62636214-62653509
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1962 bp
Exons: 5
Sources: Biogazelle lncRNA chip; NONCODE v4
Alternative transcript names: ENST00000500610; NONHSAT029078
Alternative gene names: ENSG00000245867


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.5913 non-coding 
CPAT coding probability 9.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM19A2-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C12orf61-2:1
3.1 lnc-C12orf61-2:1
4.0 lnc-FAM19A2-2:7
4.1 lnc-FAM19A2-2:7
5.0 lnc-FAM19A2-2:7
5.1 lnc-FAM19A2-2:7
5.2 lnc-FAM19A2-2:7