Transcript: lnc-FAM19A5-17:1

Basic information

LNCipedia transcript ID: lnc-FAM19A5-17:1 
LNCipedia gene ID: lnc-FAM19A5-17
Location (hg19): chr22:48411735-48418798
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5221 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1735:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.2902 non-coding 
CPAT coding probability 3.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM19A5-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FAM19A5-6:3
4.1 lnc-TBC1D22A-4:23
5.0 lnc-TBC1D22A-4:23
5.1 lnc-GRAMD4-10:1
5.2 lnc-FAM19A5-17:1