Transcript: lnc-FAM210A-6:2

Basic information

LNCipedia transcript ID: lnc-FAM210A-6:2 
LNCipedia gene ID: lnc-FAM210A-6
Ensembl Gene ID: ENSG00000267529
Ensembl Transcript ID: ENST00000590468
Location (hg19): chr18:13471849-13472669
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 570 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT058437; ENST00000590468.1
Alternative gene names: ENSG00000267529.2; RP11-53B2.1; ENSG00000267529.3; AP005131.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.8679 non-coding 
CPAT coding probability 16.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM210A-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM210A-6:2
4.0 lnc-FAM210A-6:2
4.1 lnc-FAM210A-6:2
5.0 lnc-FAM210A-6:2
5.1 lnc-SMAD2-242:2
5.2 lnc-FAM210A-6:2