Transcript: lnc-FAM217A-1:9

Basic information

LNCipedia transcript ID: lnc-FAM217A-1:9 
LNCipedia gene ID: lnc-FAM217A-1
Location (hg19): chr6:4010994-4018882
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1044 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230648.1|FTMT22100034657.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.8132 non-coding 
CPAT coding probability 5.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM217A-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C6orf146-1:11
5.0 lnc-C6orf146-1:11
5.1 lnc-ECI2-13:9
5.2 lnc-FAM217A-1:9