Transcript: lnc-FAM72A-3:1

Basic information

LNCipedia transcript ID: lnc-FAM72A-3:1 
LNCipedia gene ID: lnc-FAM72A-3
Location (hg19): chr1:206136916-206154164
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 574 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT009038
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 182.4366 coding 
CPAT coding probability 5.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM72A-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM72A-3:1
4.0 lnc-FAM72A-3:1
4.1 lnc-FAM72A-3:1
5.0 lnc-FAM72A-3:1
5.1 lnc-NUCKS1-17:1
5.2 lnc-FAM72A-3:1