Transcript: lnc-FAM72D-3:2

Basic information

LNCipedia transcript ID: lnc-FAM72D-3:2 
LNCipedia gene ID: lnc-FAM72D-3
Location (hg19): chr1:144083445-144085155
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1711 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001eng_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.2844 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM72D-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM72D-3:2
4.0 lnc-FAM72D-3:2
4.1 lnc-FAM72D-3:2
5.0 lnc-FAM72D-3:2
5.1 lnc-FCGR1A-64:2
5.2 lnc-FAM72D-3:2