Transcript: lnc-FAM83G-5:3

Basic information

LNCipedia transcript ID: lnc-FAM83G-5:3 
LNCipedia gene ID: lnc-FAM83G-5
Location (hg19): chr17:18737515-18759483
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 440 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000033171.1|ENCT00000181578.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.9394 non-coding 
CPAT coding probability 6.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM83G-5:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM83G-5:3
5.0 lnc-FAM83G-5:3
5.1 lnc-B9D1-25:1
5.2 lnc-FAM83G-5:3