Transcript: lnc-FAM92A-1:1

Basic information

LNCipedia transcript ID: lnc-FAM92A-1:1 
LNCipedia gene ID: lnc-FAM92A-1
RefSeq ID: NR_027259
Location (hg19): chr8:94752339-94753047
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 709 bp
Exons: 1
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_027259; NR_027259.1
Alternative gene names: PRO1905; RBM12B-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.7799 non-coding 
CPAT coding probability 10.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM92A-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C8orf39-3:1
4.0 RBM12B-AS1:1
4.1 RBM12B-AS1:1
5.0 RBM12B-AS1:1
5.1 lnc-CA2-91:1
5.2 lnc-FAM92A-1:1