Transcript: lnc-FARS2-2:1

Basic information

LNCipedia transcript ID: lnc-FARS2-2:1 
LNCipedia gene ID: lnc-FARS2-2
Location (hg19): chr6:5892673-5986353
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1357 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000510466
Alternative gene names: ENSG00000251145; AL136307.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.821 non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FARS2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FARS2-2:1
3.1 lnc-FARS2-2:1
4.0 lnc-FARS2-2:1
4.1 lnc-FARS2-2:1
5.0 lnc-FARS2-2:1
5.1 lnc-PRPF4B-71:1
5.2 lnc-FARS2-2:1