Transcript: lnc-FASTKD3-2:2

Basic information

LNCipedia transcript ID: lnc-FASTKD3-2:2 
LNCipedia gene ID: lnc-FASTKD3-2
Location (hg19): chr5:7859272-7869150
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1007 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT100263; NR_073608
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 75.8835 coding 
CPAT coding probability 0.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FASTKD3-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FASTKD3-2:2
4.0 lnc-FASTKD3-2:2
4.1 lnc-FASTKD3-2:2
5.0 lnc-FASTKD3-2:2
5.1 lnc-IRX2-85:1
5.2 lnc-FASTKD3-2:2