Transcript: lnc-FAT3-2:3

Basic information

LNCipedia transcript ID: lnc-FAT3-2:3 
LNCipedia gene ID: lnc-FAT3-2
Location (hg19): chr11:91575860-91577740
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 300 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT023612
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -172.381 non-coding 
CPAT coding probability 1.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAT3-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-201M22.1.1-2:4
4.0 lnc-RP11-201M22.1.1-2:4
4.1 lnc-RP11-201M22.1.1-2:4
5.0 lnc-RP11-201M22.1.1-2:4
5.1 lnc-TRIM49C-10:2
5.2 lnc-FAT3-2:3