Transcript: lnc-FAXDC2-4:2

Basic information

LNCipedia transcript ID: lnc-FAXDC2-4:2 
LNCipedia gene ID: lnc-FAXDC2-4
Location (hg19): chr5:154131150-154134553
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2427 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000081724.1|MICT00000291878.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.9437 non-coding 
CPAT coding probability 1.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAXDC2-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C5orf4-4:1
5.0 lnc-C5orf4-4:1
5.1 lnc-FAXDC2-2:1
5.2 lnc-FAXDC2-4:2