Transcript: lnc-FBXO17-1:4

Basic information

LNCipedia transcript ID: lnc-FBXO17-1:4 
LNCipedia gene ID: lnc-FBXO17-1
Location (hg19): chr19:39504600-39505190
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 467 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00027754
Alternative gene names: XLOC_013337; linc-FBXO17


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.1532 non-coding 
CPAT coding probability 5.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXO17-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FBXO27-1:1
3.1 lnc-FBXO27-1:1
4.0 lnc-FBXO27-1:1
4.1 lnc-FBXO27-1:1
5.0 lnc-FBXO27-1:1
5.1 lnc-FBXO17-1:2
5.2 lnc-FBXO17-1:4