Transcript: lnc-FBXO32-2:1

Basic information

LNCipedia transcript ID: lnc-FBXO32-2:1 
LNCipedia gene ID: lnc-FBXO32-2
Ensembl Gene ID: ENSG00000254113
Ensembl Transcript ID: ENST00000518970
Location (hg19): chr8:124575310-124581002
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 537 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000518970; ENST00000518970.1; RP11-174I12.2-001; OTTHUMT00000381287.1; NONHSAT128559
Alternative gene names: ENSG00000254113; RP11-174I12.2; ENSG00000254113.1; OTTHUMG00000164982.1; AC090193.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -132.0783 non-coding 
CPAT coding probability 8.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXO32-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FBXO32-2:1
3.1 lnc-FBXO32-2:1
4.0 lnc-FBXO32-2:1
4.1 lnc-FBXO32-2:1
5.0 lnc-FBXO32-2:1
5.1 lnc-WASHC5-27:2
5.2 lnc-FBXO32-2:1