Transcript: lnc-FBXO33-2:1

Basic information

LNCipedia transcript ID: lnc-FBXO33-2:1 
LNCipedia gene ID: lnc-FBXO33-2
Ensembl Gene ID: ENSG00000258636
Ensembl Transcript ID: ENST00000557067
Location (hg19): chr14:42057064-42074059
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 530 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000557067; ENST00000557067.1; CTD-2298J14.2-001; OTTHUMT00000410026.1; NONHSAT036575
Alternative gene names: ENSG00000258636; CTD-2298J14.2; ENSG00000258636.1; OTTHUMG00000170691.1; AL121821.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.6625 non-coding 
CPAT coding probability 3.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXO33-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FBXO33-2:1
3.1 lnc-FBXO33-2:1
4.0 lnc-FBXO33-2:1
4.1 lnc-FBXO33-2:1
5.0 lnc-FBXO33-2:1
5.1 lnc-RTN1-170:10
5.2 lnc-FBXO33-2:1