Transcript: lnc-FBXO4-1:1

Basic information

LNCipedia transcript ID: lnc-FBXO4-1:1 
LNCipedia gene ID: lnc-FBXO4-1
Location (hg19): chr5:42157044-42157966
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 640 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010676; NONHSAT101200
Alternative gene names: XLOC_004360; linc-GHR


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.6652 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXO4-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FBXO4-1:1
3.1 lnc-FBXO4-1:1
4.0 lnc-FBXO4-1:1
4.1 lnc-FBXO4-1:1
5.0 lnc-FBXO4-1:1
5.1 lnc-CARD6-18:2
5.2 lnc-FBXO4-1:1