Transcript: lnc-FBXO44-18:1

Basic information

LNCipedia transcript ID: lnc-FBXO44-18:1 
LNCipedia gene ID: lnc-FBXO44-18
Ensembl Gene ID: ENSG00000284708
Ensembl Transcript ID: ENST00000642131
Location (hg19): chr1:11683615-11703473
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2094 bp
Exons: 2
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642131.1
Alternative gene names: ENSG00000284708.1; AL031731.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -72.727 non-coding 
CPAT coding probability 5.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXO44-18:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-VPS13D-18:1
5.1 lnc-VPS13D-18:1
5.2 lnc-FBXO44-18:1