Transcript: lnc-FBXW11-3:1

Basic information

LNCipedia transcript ID: lnc-FBXW11-3:1 
LNCipedia gene ID: lnc-FBXW11-3
Location (hg19): chr5:170732985-170735809
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2825 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000528269.1; RP11-546B8.6-001; OTTHUMT00000388769.1; NONHSAT105074
Alternative gene names: ENSG00000255373.1; RP11-546B8.6; OTTHUMG00000166260.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.0759 non-coding 
CPAT coding probability 64.02% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FBXW11-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXW11-3:1
4.0 lnc-FBXW11-3:1
4.1 lnc-FBXW11-3:1
5.0 lnc-FBXW11-3:1
5.1 lnc-PDLIM7-98:1
5.2 lnc-FBXW11-3:1