Transcript: lnc-FCGR3B-1:1

Basic information

LNCipedia transcript ID: lnc-FCGR3B-1:1 
LNCipedia gene ID: lnc-FCGR3B-1
Location (hg19): chr1:161607438-161608218
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 462 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00000653; ENST00000449604.1; RP11-474I16.1-001; OTTHUMT00000083315.1; NONHSAT007196
Alternative gene names: XLOC_001068; linc-FCGR3B-2; ENSG00000231813.1; RP11-474I16.1; OTTHUMG00000034467.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.5543 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FCGR3B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FCGR3B-1:1
3.1 lnc-FCGR3B-1:1
4.0 lnc-FCGR3B-1:1
4.1 lnc-FCGR3B-1:1
5.0 lnc-FCGR3B-1:1
5.1 lnc-SH2D1B-15:1
5.2 lnc-FCGR3B-1:1