Transcript: lnc-FCGR3B-2:2

Basic information

LNCipedia transcript ID: lnc-FCGR3B-2:2 
LNCipedia gene ID: lnc-FCGR3B-2
Ensembl Gene ID: ENSG00000234211
Ensembl Transcript ID: ENST00000626340
Location (hg19): chr1:161643220-161644554
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 758 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000626340.1
Alternative gene names: ENSG00000234211.2; RP11-25K21.1; AL451067.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -115.9259 non-coding 
CPAT coding probability 10.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FCGR3B-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FCGR3B-2:2
4.1 lnc-FCGR3B-2:2
5.0 lnc-FCGR3B-2:2
5.1 lnc-SH2D1B-14:2
5.2 lnc-FCGR3B-2:2