Transcript: lnc-FCGR3B-4:2

Basic information

LNCipedia transcript ID: lnc-FCGR3B-4:2 
LNCipedia gene ID: lnc-FCGR3B-4
Location (hg19): chr1:161735115-161735766
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 324 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: TCONS_00000656; ENST00000431097.1; RP11-474I16.8-002; OTTHUMT00000083587.1
Alternative gene names: XLOC_001070; linc-FCGR3B-3; ENSG00000226889.1; RP11-474I16.8; OTTHUMG00000034539.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -196.4018 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FCGR3B-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FCGR3B-3:2
3.1 lnc-FCGR3B-4:2
4.0 lnc-FCGR3B-4:2
4.1 lnc-FCGR3B-4:2
5.0 lnc-FCGR3B-4:2
5.1 lnc-SH2D1B-13:14
5.2 lnc-FCGR3B-4:2