Transcript: lnc-FCHSD2-2:11

Basic information

LNCipedia transcript ID: lnc-FCHSD2-2:11 
LNCipedia gene ID: lnc-FCHSD2-2
Location (hg19): chr11:72920555-72929202
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 282 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019702; NONHSAT022814
Alternative gene names: XLOC_009500; linc-FCHSD2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.4161 non-coding 
CPAT coding probability 1.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FCHSD2-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FCHSD2-2:1
3.1 lnc-FCHSD2-3:1
4.0 lnc-FCHSD2-3:1
4.1 lnc-FCHSD2-2:11
5.0 lnc-FCHSD2-2:11
5.1 lnc-UCP3-29:10
5.2 lnc-FCHSD2-2:11