Transcript: lnc-FEZ2-3:2

Basic information

LNCipedia transcript ID: lnc-FEZ2-3:2 
LNCipedia gene ID: lnc-FEZ2-3
Ensembl Gene ID: ENSG00000273090
Ensembl Transcript ID: ENST00000609765
Location (hg19): chr2:36740398-36740875
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 478 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609765.1
Alternative gene names: ENSG00000273090.1; RP11-78I14.1; AC007378.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.9185 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FEZ2-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007401.2.1-3:1
4.0 lnc-AC007401.2.1-3:1
4.1 lnc-AC007401.2.1-3:1
5.0 lnc-AC007401.2.1-3:1
5.1 lnc-MAP4K3-65:1
5.2 lnc-FEZ2-3:2