Transcript: lnc-FGF22-2:1

Basic information

LNCipedia transcript ID: lnc-FGF22-2:1 
LNCipedia gene ID: lnc-FGF22-2
Location (hg19): chr19:633730-637154
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3113 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000038156.1|MICT00000165265.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.8772 non-coding 
CPAT coding probability 2.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGF22-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FGF22-2:1
5.0 lnc-FGF22-2:1
5.1 lnc-RPL36-177:1
5.2 lnc-FGF22-2:1