Transcript: lnc-FGF9-3:12

Basic information

LNCipedia transcript ID: lnc-FGF9-3:12 
LNCipedia gene ID: lnc-FGF9-3
Location (hg19): chr13:22615114-22638150
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 449 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000013953.1|ENCT00000110666.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.1152 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGF9-3:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FGF9-3:12
5.0 lnc-FGF9-3:12
5.1 lnc-GTF3A-103:6
5.2 lnc-FGF9-3:12