Transcript: lnc-FGFR1OP-20:3

Basic information

LNCipedia transcript ID: lnc-FGFR1OP-20:3 
LNCipedia gene ID: lnc-FGFR1OP-20
Location (hg19): chr6:166650457-166670432
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1545 bp
Exons: 5
Sources: Refseq - Dec 2014
Alternative transcript names: NR_125862
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -62.5014 non-coding 
CPAT coding probability 4.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGFR1OP-20:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FGFR1OP-4:3
4.0 lnc-FGFR1OP-4:3
4.1 lnc-FGFR1OP-4:3
5.0 lnc-FGFR1OP-4:3
5.1 lnc-SYTL3-67:3
5.2 lnc-FGFR1OP-20:3