Transcript: lnc-FHIT-1:1

Basic information

LNCipedia transcript ID: lnc-FHIT-1:1 
LNCipedia gene ID: lnc-FHIT-1
Location (hg19): chr3:59627441-59644000
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 227 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006518; NONHSAT090153
Alternative gene names: XLOC_003142; linc-C3orf67-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -175.156 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FHIT-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FHIT-1:1
3.1 lnc-FHIT-1:1
4.0 lnc-FHIT-1:1
4.1 lnc-FHIT-1:1
5.0 lnc-FHIT-1:1
5.1 lnc-DENND6A-20:1
5.2 lnc-FHIT-1:1