Transcript: lnc-FKBP1A-2:1

Basic information

LNCipedia transcript ID: lnc-FKBP1A-2:1 
LNCipedia gene ID: lnc-FKBP1A-2
Location (hg19): chr20:1333801-1352641
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 731 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: l_2057_chr20:1333800-1352641_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.7934 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FKBP1A-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FKBP1A-2:1
4.0 lnc-FKBP1A-2:1
4.1 lnc-FKBP1A-2:1
5.0 lnc-FKBP1A-2:1
5.1 lnc-RNF24-64:1
5.2 lnc-FKBP1A-2:1