Transcript: lnc-FKBP5-1:3

Basic information

LNCipedia transcript ID: lnc-FKBP5-1:3 
LNCipedia gene ID: lnc-FKBP5-1
RefSeq ID: NR_027117
Location (hg19): chr6:35694539-35704724
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1732 bp
Exons: 10
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT112190; NR_027117; NR_027117.2
Alternative gene names: LOC285847


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.514 non-coding 
CPAT coding probability 20.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FKBP5-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FKBP5-1:3
4.0 lnc-FKBP5-1:3
4.1 lnc-FKBP5-1:3
5.0 lnc-FKBP5-1:3
5.1 lnc-CPNE5-31:2
5.2 lnc-FKBP5-1:3